The next generation of laboratory software
Platform solutions for laboratory operations
We help labs coordinate workflows, track inventory, perform genomic analysis, integrate systems, manage clinical data, maintain compliance, and much more.
| ID | Type | Step | Status | Edit |
|---|---|---|---|---|
AXV9-PF5510 | NGS | Sequencing | In Progress | |
AXV9-PF5511 | PCR | Accession | In Progress | |
AXV9-PF5512 | Pooled PCR | Elution | In Progress | |
AXV9-PF5513 | Calibration | Review | In Progress |
Streamline clinical and scientific process flows
Manage lab processes from end-to-end using our modular and extensible workflow engine. Connect your laboratory equipment, clinical data repositories, software tools, bioinformatics pipelines, and more.
And More
Data In
Data Out
Data In
Data Out
1
2
3
4
Data In
Data Out
Data In
Data Out
Track inventory and manage lab logistics
Unified inventory management for samples, reagents, equipment, and more. All lab assets are automatically tracked based on activity to provide the single source of truth across all operations.
And More
A1
AXV9-PF55-1
A2
AXV9-PF55-2
A3
AXV9-PF55-3
A4
AXV9-PF55-4
A5
AXV9-PF55-5
A6
AXV9-PF55-6
3.9--1: Pulling from biocontainers/pythonc1a16a04cedd: Pulling fs layer4ca545ee6d5d: Pulling fs layer5f7a6762e5ca: Pulling fs layer4ca545ee6d5d: Verifying Checksum4ca545ee6d5d: Download completec1a16a04cedd: Verifying Checksumc1a16a04cedd: Download completec1a16a04cedd: Pull complete4ca545ee6d5d: Pull complete5f7a6762e5ca: Download complete5f7a6762e5ca: Pull completeDigest: sha256:d97d2b329b4e44d2e07a9737ba348b185d6a47f34fba0ef301d44d11669cac60<workflow workflow=""---"stopCodons": { "enabled": true, "ignoredStopCodons": [ { "geneName": "ORF3a", "codon": 253 }, { "geneName": "ORF7a", "codon": 37 }, { "geneName": "ORF7a", "codon": 40 }, { "geneName": "ORF7a", "codon": 61 }, { "geneName": "ORF7a", "codon": 75 }, { "geneName": "ORF7a", "codon": 76 }, { "geneName": "ORF7a", "codon": 89 }, { "geneName": "ORF7a", "codon": 93 }, { "geneName": "ORF7a", "codon": 94 }, { "geneName": "ORF7a", "codon": 120 }, { "geneName": "ORF7b", "codon": 2 }, { "geneName": "ORF7b", "codon": 32 }, { "geneName": "ORF7b", "codon": 38 }, { "geneName": "ORF8", "codon": 17 }, { "geneName": "ORF8", "codon": 18 }, { "geneName": "ORF8", "codon": 26 }, { "geneName": "ORF8", "codon": 58 }, { "geneName": "ORF8", "codon": 63 }, { "geneName": "ORF8", "codon": 67 }, { "geneName": "ORF8", "codon": 105 }, { "geneName": "ORF8", "codon": 109 }/>Data In
Data Out
Data In
Data Out
Bioinformatic Analysis
Optimized Infrastructure
We handle the stack so you can focus on the science. Workflow's pipeline orchestration engine offers a variety of tools for data transformation, data integration, data visualization, and more.DNA sequencing
Data Types
RNA sequencing
Epigenomics
Manage all of your data in one place
Mount your cloud storage to manage and access your data using the cloud filesystem browser for easy and secure data management.
Import a run file to view data
XV1-A.fasta
Upload data to your own cloud storage
Import data from any source and store it in your own cloud storage system like AWS S3, Azure Blob Storage, Google Cloud Storage, or MinIO.
Powerful APIs for programmatic diagnostics
Workflow’s intuitive APIs and clear documentation make it easy to automate your processes, and easy to iterate as your operation grows and changes.
const sdk = require('api')('@workflowhealth/v0.5.0#dw98p4zl8esmhac');
sdk.server('https://api.sandbox-1.workflowhealth.com/v0.5');
sdk.createPatients({
patients: [
{
screeningStatus: 'Active',
authorizationStatus: 'Authorized - Digital'
}
]
}, { clientId: 'clientId' })
.then(res => console.log(res))
.catch(err => console.error(err));
Comprehensive language support
Workflow libraries are available for all of the most commonly used languages and frameworks to help you get started quickly.
Workflow is built for interoperability and bidirectional data exchange with clinical platforms. We support HL7 V2 and FHIR R4 standards for data transfer, and we can interface with nearly any system that supports these standards.
V2
FHS|^~\&|Workflow Health^1.3.6.1.4.1.59027.1.100^ISO|Operator^11D0000000^CLIA|||202306151915|72379D94-159E-433F-AA6B-3719888C2D7FBHS|^~\&|Workflow Health^1.3.6.1.4.1.59027.1.100^ISO|Operator^11D0000000^CLIA|||202306151915|72379D94-159E-433F-AA6B-3719888C2D7FMSH|^~\&|Workflow Health^1.3.6.1.4.1.59027.1.100^ISO|Operator^11D0000000^CLIA|||202306151915|72379D94-159E-433F-AA6B-3719888C2D7F|ORU^R01^ORU_R01|061522-40ef81cc_1655338518480|T|2.5.1|1||||USA||||PHLabReport-Batch^HL7^2.16.840.1.113883.9.11^ISOSFT|Workflow Lab Platform^^^^^^^^^|20210901-0A|Workflow Lab Platform|110000111011100111||202109242230PID|1|011ddc3b-4c88-4332-889c-d503401c418e|011ddc3b-4c88-4332-889c-d503401c418e^^^Operator&11D0000000&CLIA^^Operator&11D0000000&CLIA||EXAMPLE^EXAMPLE^^^^^L||19710731|F||2106-3^White^HL70005|1000 805 West EXAMPLE St.^^Atlanta^GA^30349^^^^EXAMPLE||^PRN^^^^130^7617014|||||||||2135-2^Hispanic or Latino^HL70189|ORC|RE|061522-40ef81cc^Workflow Health^1.3.6.1.4.1.59027.1.100^ISO|061522-40ef81cc_1655338518480^Workflow Health^1.3.6.1.4.1.59027.1.100^ISO|||||||||1477534436^Johnson^John^^^^^^NPI&2.16.840.1.113883.4.6&ISO^^^^NPI|||||||||EXAMPLE|905 EXAMPLE St.^^Atlanta^GA^30349|^WPN^^^^130^7714101|9330 Demo Drive 503^^Dallas^TX^75218|F|OBR|1|061522-40ef81cc^Workflow Health^1.3.6.1.4.1.59027.1.100^ISO|061522-40ef81cc_1655338518480^Workflow Health^1.3.6.1.4.1.59027.1.100^ISO|94500-6^SARS coronavirus 2 RNA [Presence] in Respiratory specimen by NAA with probe detection^LN|||202306150845|||||||202306150845||1477534436^Johnson^John^^^^^^NPI&2.16.840.1.113883.4.6&ISO^^^^NPI|^WPN^^^^000^0000000||||||||F|||||||OBX|1|CWE|94500-6^SARS coronavirus 2 RNA [Presence] in Respiratory specimen by NAA with probe detection^LN^^^||260415000^Not detected^SCT||Negative|A|||F|||202306151915|11D0000000||TaqPath COVID-19 Combo Kit_EUA^^99ELR||202306151915||||Operator^^^^^CLIA^^^^11D0000000|7000 Demo Blvd Suite 380^^Atlanta^GA^30349|SPM|1|061522-40ef81cc^061522-40ef81cc||697989009^Anterior nares swab^SCT^^^^^|||SWD|697989009^Anterior nares swab^SCT|||||||||202306151915|202306151915MSH|^~\&|Workflow Health^1.3.6.1.4.1.59027.1.100^ISO|Operator^11D0000000^CLIA|||202306151915|72379D94-159E-433F-AA6B-3719888C2D7F|ORU^R01^ORU_R01|061522-40ef81cc_1655338518480|T|2.5.1|1||||USA||||PHLabReport-Batch^HL7^2.16.840.1.113883.9.11^ISOSFT|Workflow Lab Platform^^^^^^^^^|20210901-0A|Workflow Lab Platform|110000111011100111||202109242230PID|1|011ddc3b-4c88-4332-889c-d503401c418e|011ddc3b-4c88-4332-889c-d503401c418e^^^Operator&11D0000000&CLIA^^Operator&11D0000000&CLIA||EXAMPLE^EXAMPLE^^^^^L||19710731|F||2106-3^White^HL70005|1000 805 West EXAMPLE St.^^Atlanta^GA^30349^^^^EXAMPLE||^PRN^^^^130^7617014|||||||||2135-2^Hispanic or Latino^HL70189|ORC|RE|061522-40ef81cc^Workflow Health^1.3.6.1.4.1.59027.1.100^ISO|061522-40ef81cc_1655338518480^Workflow Health^1.3.6.1.4.1.59027.1.100^ISO|||||||||1477534436^Johnson^John^^^^^^NPI&2.16.840.1.113883.4.6&ISO^^^^NPI|||||||||EXAMPLE|905 EXAMPLE St.^^Atlanta^GA^30349|^WPN^^^^130^7714101|9330 Demo Drive 503^^Dallas^TX^75218|F|OBR|1|061522-40ef81cc^Workflow Health^1.3.6.1.4.1.59027.1.100^ISO|061522-40ef81cc_1655338518480^Workflow Health^1.3.6.1.4.1.59027.1.100^ISO|94500-6^SARS coronavirus 2 RNA [Presence] in Respiratory specimen by NAA with probe detection^LN|||202306150845|||||||202306150845||1477534436^Johnson^John^^^^^^NPI&2.16.840.1.113883.4.6&ISO^^^^NPI|^WPN^^^^000^0000000||||||||F|||||||OBX|1|CWE|94500-6^SARS coronavirus 2 RNA [Presence] in Respiratory specimen by NAA with probe detection^LN^^^||260415000^Not detected^SCT||Negative|A|||F|||202306151915|11D0000000||TaqPath COVID-19 Combo Kit_EUA^^99ELR||202306151915||||Operator^^^^^CLIA^^^^11D0000000|7000 Demo Blvd Suite 380^^Atlanta^GA^30349|SPM|1|061522-40ef81cc^061522-40ef81cc||697989009^Anterior nares swab^SCT^^^^^|||SWD|697989009^Anterior nares swab^SCT|||||||||202306151915|202306151915Industry standard data exchange
Connect with legacy systems using HL7, the most widely used healthcare messaging standard for exchanging clinical information.
Easily connect with EHR/EMR systems, practice management systems, and other healthcare IT systems to exchange data in parallel with Workflow's Lab API for vendor-agnostic integration across all platforms.
R4
{ "resourceType" : "MolecularSequence", "id" : "seq-ordinal", "text" : { "status" : "generated", "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: MolecularSequence</b><a name=\"seq-ordinal\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource MolecularSequence "seq-ordinal" </p></div><p><b>type</b>: rna</p><blockquote><p><b>relative</b></p><p><b>coordinateSystem</b>: 1-based character counting <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA30102-0)</span></p><p><b>ordinalPosition</b>: 1</p><p><b>sequenceRange</b>: 1-2194</p><h3>StartingSequences</h3><table class=\"grid\"><tr><td>-</td><td><b>Sequence[x]</b></td><td><b>WindowStart</b></td><td><b>WindowEnd</b></td></tr><tr><td>*</td><td>NM_000141.5 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (#NM_000141.5)</span></td><td>1</td><td>2194</td></tr></table></blockquote><blockquote><p><b>relative</b></p><p><b>coordinateSystem</b>: 1-based character counting <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA30102-0)</span></p><p><b>ordinalPosition</b>: 2</p><p><b>sequenceRange</b>: 2194-4899</p><h3>StartingSequences</h3><table class=\"grid\"><tr><td>-</td><td><b>Sequence[x]</b></td><td><b>WindowStart</b></td><td><b>WindowEnd</b></td></tr><tr><td>*</td><td>NM_000245.4 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (#NM_000245.4)</span></td><td>1923</td><td>6822</td></tr></table></blockquote></div>" }, "type" : "rna", "relative" : [{ "coordinateSystem" : { "coding" : [{ "system" : "http://loinc.org", "code" : "LA30102-0", "display" : "1-based character counting" }] }, "ordinalPosition" : 1, "sequenceRange" : { "low" : { "value" : 1 }, "high" : { "value" : 2194 } }, "startingSequence" : { "sequenceCodeableConcept" : { "coding" : [{ "system" : "http://www.ncbi.nlm.nih.gov/nuccore/", "code" : "NM_000141.5" }] }, "windowStart" : 1, "windowEnd" : 2194 } }, { "coordinateSystem" : { "coding" : [{ "system" : "http://loinc.org", "code" : "LA30102-0", "display" : "1-based character counting" }] }, "ordinalPosition" : 2, "sequenceRange" : { "low" : { "value" : 2194 }, "high" : { "value" : 4899 } }, "startingSequence" : { "sequenceCodeableConcept" : { "coding" : [{ "system" : "http://www.ncbi.nlm.nih.gov/nuccore/", "code" : "NM_000245.4" }] }, "windowStart" : 1923, "windowEnd" : 6822 } }]}"subject": { "reference": "Patient/pat2"},"encounter": { "reference": "Encounter/example"},"effectiveDateTime": "2023-05-04T08:30:00+11:00","issued": "2023-05-04T11:45:33+11:00","performer": [ { "reference": "Organization/1832473e-2fe0-452d-abe9-3cdb9879522f", "display": "Workflow Laboratory, Inc" }Fast Healthcare Interoperability Resources
Use FHIR to exchange clinical and administrative data between modern healthcare systems, digital health platforms, and API providers.
Integrated documentation for regulatory compliance
Create and manage process documentation for your lab operations. All documentation is automatically tracked, versioned, and easily accessible for your team.
And More
RT-PCR SOP
STEP 17 / 24
STEP 17
Transfer Samples to PCR Plate
Click on ‘Transfer to PCR Plate’
If the 384 well block is installed on your instrument, select plate type
384 well plate
If the 96 well block is installed on your instrument, select plate type
96 well plate
In the case that the 384 well block is installed on your instrument, you have the option to assign samples from up to 4
96 well plates
to your PCR workflow.You will then have the option to assign a plate position of each of the 4 plates you will be adding to your workflow.
Click ‘Transfer’ once done.
See Figures 8, 9, 10, 11
Our team publishes guides to keep you up to date with the latest developments in the fields of genomics, computational biology, bioinformatics, and more.
Diagnostics
Mass Spectrometry
Basic Principles and Applications
"Workflow makes it easy to connect with partners, vendors, and customers. We manage our labs with Workflow and it's been a game changer."
Access a complete lab software solution built for your operational requirements. Not sure where to begin? We’re here to help with any questions.
